Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LC55x_RS25565 | Not Available | Positive | 6323839 - 6324561 | 26661.4 |
| amidohydrolase | LC55x_RS25570 | Not Available | Positive | 6325051 - 6326385 | 46911.7 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | LC55x_RS25575 | Not Available | Positive | 6327286 - 6328098 | 29843.0 |
| lysm peptidoglycan-binding domain-containing protein | LC55x_RS25580 | Not Available | Positive | 6328268 - 6328570 | 11035.6 |
| hypothetical protein | LC55x_RS25585 | Not Available | Positive | 6328625 - 6329119 | 16745.8 |
| ychj family protein | LC55x_RS25590 | Not Available | Negative | 6329580 - 6329981 | 14755.5 |
| upf0149 family protein | LC55x_RS25595 | Not Available | Positive | 6330052 - 6330759 | 26615.9 |
| ykgj family cysteine cluster protein | LC55x_RS25600 | Not Available | Positive | 6330916 - 6331296 | 13544.9 |
| hypothetical protein | LC55x_RS28450 | Not Available | Positive | 6331361 - 6331903 | 19859.3 |
| duf4288 domain-containing protein | LC55x_RS25605 | Not Available | Negative | 6331974 - 6332348 | 14181.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
