Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | LC55x_RS25340 | Not Available | Positive | 6270778 - 6271671 | 32716.8 |
| lysm domain-containing protein | LC55x_RS25345 | Not Available | Negative | 6271801 - 6272406 | 21158.3 |
| m28 family peptidase | LC55x_RS25350 | Not Available | Negative | 6272560 - 6273579 | 37775.1 |
| ai-2e family transporter | LC55x_RS25355 | Not Available | Negative | 6273608 - 6274558 | 34341.6 |
| hypothetical protein | LC55x_RS25360 | Not Available | Positive | 6274917 - 6275387 | 16674.7 |
| hypothetical protein | LC55x_RS27535 | Not Available | Negative | 6275454 - 6275648 | 6408.11 |
| hypothetical protein | LC55x_RS27540 | Not Available | Positive | 6275932 - 6276333 | 14236.0 |
| s8 family serine peptidase | LC55x_RS25365 | Not Available | Positive | 6276495 - 6277961 | 50652.8 |
| hypothetical protein | LC55x_RS25370 | Not Available | Negative | 6278024 - 6278494 | 16869.0 |
| hypothetical protein | LC55x_RS25375 | Not Available | Negative | 6279022 - 6279600 | 20278.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
