Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | LC55x_RS25095 | Not Available | Negative | 6218021 - 6218461 | 16289.5 |
| duf411 domain-containing protein | LC55x_RS25100 | Not Available | Negative | 6218720 - 6219259 | 18890.8 |
| cytochrome c | LC55x_RS25105 | Not Available | Negative | 6219314 - 6220141 | 28722.6 |
| copl family metal-binding regulatory protein | LC55x_RS25110 | Not Available | Negative | 6220421 - 6220870 | 15213.5 |
| tonb family protein | LC55x_RS25115 | Not Available | Negative | 6220960 - 6221646 | 24435.1 |
| hypothetical protein | LC55x_RS25120 | Not Available | Positive | 6221953 - 6222237 | 10268.5 |
| hypothetical protein | LC55x_RS25125 | Not Available | Positive | 6222267 - 6223394 | 40935.4 |
| toxic anion resistance protein | LC55x_RS25130 | Not Available | Positive | 6223399 - 6224613 | 44172.2 |
| vwa domain-containing protein | LC55x_RS25135 | Not Available | Positive | 6224661 - 6226268 | 57362.1 |
| hypothetical protein | LC55x_RS25140 | Not Available | Positive | 6226281 - 6226964 | 24589.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
