Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | LC55x_RS24955 | Not Available | Negative | 6189197 - 6189802 | 21798.1 |
| hypothetical protein | LC55x_RS24960 | Not Available | Negative | 6189802 - 6190296 | 17974.9 |
| gnat family n-acetyltransferase | LC55x_RS24965 | Not Available | Negative | 6190660 - 6191301 | 22894.2 |
| amidase | LC55x_RS24970 | Not Available | Negative | 6191442 - 6192965 | 54916.8 |
| gnat family n-acetyltransferase | LC55x_RS24975 | Not Available | Negative | 6193120 - 6193542 | 15319.3 |
| hypothetical protein | LC55x_RS24980 | Not Available | Positive | 6193832 - 6194059 | 7904.47 |
| pd40 domain-containing protein | LC55x_RS24985 | Not Available | Negative | 6194244 - 6195191 | 33899.4 |
| hypothetical protein | LC55x_RS24990 | Not Available | Negative | 6195202 - 6196278 | 40806.7 |
| lysr substrate-binding domain-containing protein | LC55x_RS24995 | Not Available | Positive | 6196387 - 6197298 | 33116.5 |
| alpha/beta fold hydrolase | LC55x_RS25000 | Not Available | Negative | 6197326 - 6198369 | 38855.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
