Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase domain-containing protein | LC55x_RS24905 | Not Available | Positive | 6176508 - 6178028 | 55161.4 |
| atp-binding protein | LC55x_RS24910 | Not Available | Positive | 6178036 - 6179694 | 60400.6 |
| beta-1,3-glucanase family protein | LC55x_RS24915 | Not Available | Negative | 6180121 - 6181425 | 44860.3 |
| serine hydrolase | LC55x_RS24920 | Not Available | Positive | 6181769 - 6183151 | 49152.3 |
| lyttr family dna-binding domain-containing protein | LC55x_RS24925 | Not Available | Negative | 6183129 - 6183833 | 26333.8 |
| sensor histidine kinase | LC55x_RS24930 | Not Available | Negative | 6183830 - 6185218 | 49886.7 |
| na+/h+ antiporter | LC55x_RS24935 | Not Available | Positive | 6185166 - 6186749 | 56293.8 |
| hypothetical protein | LC55x_RS24940 | Not Available | Positive | 6186806 - 6187327 | 19060.9 |
| aaa family atpase | LC55x_RS24945 | Not Available | Negative | 6187351 - 6187899 | 20623.7 |
| glutathione s-transferase family protein | LC55x_RS24950 | Not Available | Positive | 6188418 - 6189089 | 24911.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
