Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4034 domain-containing protein | LC55x_RS24515 | Not Available | Negative | 6104039 - 6106090 | 76827.3 |
| duf1266 domain-containing protein | LC55x_RS24520 | Not Available | Negative | 6106105 - 6107946 | 69355.4 |
| sdr family nad(p)-dependent oxidoreductase | LC55x_RS24525 | Not Available | Negative | 6108382 - 6108639 | 8875.62 |
| efflux transporter outer membrane subunit | LC55x_RS24530 | Not Available | Negative | 6108716 - 6110176 | 51063.7 |
| tetr/acrr family transcriptional regulator | LC55x_RS24535 | Not Available | Positive | 6110271 - 6110888 | 23479.9 |
| efflux rnd transporter periplasmic adaptor subunit | LC55x_RS24540 | Not Available | Positive | 6110970 - 6112079 | 38158.7 |
| efflux rnd transporter permease subunit | LC55x_RS24545 | Not Available | Positive | 6112076 - 6115165 | 112326.0 |
| ompp1/fadl family transporter | LC55x_RS24550 | Not Available | Positive | 6115233 - 6116576 | 47939.9 |
| hypothetical protein | LC55x_RS24555 | Not Available | Positive | 6116989 - 6117321 | 12106.2 |
| serine hydrolase | LC55x_RS24560 | Not Available | Positive | 6117753 - 6118871 | 40904.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
