Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yihy/virulence factor brkb family protein | LC55x_RS02210 | Not Available | Negative | 558931 - 559992 | 38168.9 |
| sec-c metal-binding domain-containing protein | LC55x_RS02215 | Not Available | Negative | 560290 - 560568 | 10542.5 |
| gatb/yqey domain-containing protein | LC55x_RS02220 | Not Available | Negative | 560751 - 561197 | 15984.7 |
| 30s ribosomal protein s21 | LC55x_RS02225 | Not Available | Negative | 561397 - 561612 | 8556.39 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | LC55x_RS02230 | Not Available | Positive | 561761 - 562783 | 35836.4 |
| dihydroneopterin aldolase | LC55x_RS02235 | Not Available | Positive | 562934 - 563287 | 12893.5 |
| duf6159 family protein | LC55x_RS02240 | Not Available | Positive | 563542 - 564369 | 28744.7 |
| hypothetical protein | LC55x_RS02245 | Not Available | Negative | 564591 - 565457 | 31649.2 |
| class i sam-dependent methyltransferase | LC55x_RS02250 | Not Available | Positive | 565679 - 566863 | 43667.1 |
| vanz family protein | LC55x_RS02255 | Not Available | Positive | 566916 - 567341 | 15299.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
