Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udgx family uracil-dna binding protein | LC55x_RS24280 | Not Available | Negative | 6045399 - 6046817 | 53489.4 |
| putative dna modification/repair radical sam protein | LC55x_RS24285 | Not Available | Negative | 6046829 - 6048073 | 46326.9 |
| hypothetical protein | LC55x_RS26500 | Not Available | Negative | 6048176 - 6048376 | 7513.89 |
| hypothetical protein | LC55x_RS24290 | Not Available | Positive | 6050312 - 6050944 | 21052.9 |
| response regulator transcription factor | LC55x_RS24300 | Not Available | Negative | 6053119 - 6053742 | 22599.9 |
| hypothetical protein | LC55x_RS27475 | Not Available | Positive | 6053999 - 6054328 | 11961.0 |
| rhs repeat-associated core domain-containing protein | LC55x_RS24305 | Not Available | Positive | 6054629 - 6059323 | 171038.0 |
| hypothetical protein | LC55x_RS27480 | Not Available | Positive | 6059328 - 6059669 | 12664.0 |
| is3 family transposase | LC55x_RS24315 | Not Available | Positive | 6059992 - 6061133 | 43929.9 |
| duf6988 family protein | LC55x_RS27485 | Not Available | Positive | 6061209 - 6061595 | 13903.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
