Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yegp family protein | LC55x_RS24095 | Not Available | Positive | 5999304 - 5999546 | 8752.23 |
| hypothetical protein | LC55x_RS27455 | Not Available | Positive | 5999605 - 6000204 | 22205.7 |
| urate hydroxylase puud | LC55x_RS24100 | Not Available | Positive | 6000726 - 6001994 | 46405.0 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | LC55x_RS26490 | Not Available | Positive | 6001984 - 6002943 | 35468.0 |
| urate hydroxylase puud | LC55x_RS24110 | Not Available | Positive | 6003046 - 6004047 | 36647.1 |
| mfs transporter | LC55x_RS24115 | Not Available | Positive | 6004044 - 6005411 | 46937.3 |
| rieske 2fe-2s domain-containing protein | LC55x_RS24120 | Not Available | Positive | 6005511 - 6006491 | 36392.0 |
| pentapeptide repeat-containing protein | LC55x_RS27985 | Not Available | Negative | 6007379 - 6008032 | 24113.3 |
| atp-binding protein | LC55x_RS24130 | Not Available | Negative | 6008416 - 6009801 | 50295.8 |
| response regulator transcription factor | LC55x_RS24135 | Not Available | Negative | 6009813 - 6010490 | 25057.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
