Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing protein | LC55x_RS23955 | Not Available | Positive | 5934490 - 5939646 | 190919.0 |
| atp-binding protein | LC55x_RS23960 | Not Available | Negative | 5939724 - 5944967 | 193634.0 |
| response regulator transcription factor | LC55x_RS26475 | Not Available | Positive | 5945449 - 5946072 | 22303.0 |
| lysr family transcriptional regulator | LC55x_RS23970 | Not Available | Negative | 5947253 - 5948149 | 32857.3 |
| sensor histidine kinase | LC55x_RS23975 | Not Available | Negative | 5948155 - 5949300 | 41805.1 |
| rab family gtpase | LC55x_RS23980 | Not Available | Negative | 5949297 - 5949797 | 18007.7 |
| hypothetical protein | LC55x_RS23985 | Not Available | Negative | 5949921 - 5950268 | 12288.6 |
| hypothetical protein | LC55x_RS23990 | Not Available | Negative | 5950549 - 5954253 | 137498.0 |
| isopeptide-forming domain-containing fimbrial protein | LC55x_RS23995 | Not Available | Negative | 5954282 - 5961448 | 241006.0 |
| hypothetical protein | LC55x_RS27430 | Not Available | Positive | 5962759 - 5963319 | 19158.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
