Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | LC55x_RS23420 | Not Available | Positive | 5810416 - 5812905 | 90914.1 |
| ribonuclease h-like domain-containing protein | LC55x_RS28620 | Not Available | Positive | 5813403 - 5814314 | 33332.0 |
| i78 family peptidase inhibitor | LC55x_RS23430 | Not Available | Positive | 5814722 - 5815027 | 10602.8 |
| i78 family peptidase inhibitor | LC55x_RS23435 | Not Available | Positive | 5815263 - 5815682 | 14353.4 |
| ribonuclease domain-containing protein | LC55x_RS23440 | Not Available | Positive | 5816114 - 5816575 | 17405.0 |
| barstar family protein | LC55x_RS23445 | Not Available | Positive | 5816572 - 5817009 | 15882.5 |
| dna topoisomerase ib | LC55x_RS23450 | Not Available | Negative | 5817040 - 5818122 | 40238.3 |
| hypothetical protein | LC55x_RS23455 | Not Available | Negative | 5818196 - 5818426 | 8173.59 |
| tcr/tet family mfs transporter | LC55x_RS23460 | Not Available | Negative | 5818512 - 5819783 | 45189.4 |
| glutamate synthase large subunit | LC55x_RS23465 | Not Available | Positive | 5820272 - 5824741 | 161981.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
