Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4272 domain-containing protein | LC55x_RS23370 | Not Available | Negative | 5799443 - 5800465 | 37586.3 |
| uvrd-helicase domain-containing protein | LC55x_RS23375 | Not Available | Negative | 5800995 - 5802974 | 73024.4 |
| sel1 repeat family protein | LC55x_RS23380 | Not Available | Positive | 5803174 - 5803929 | 28304.2 |
| thymidine kinase | LC55x_RS23385 | Not Available | Positive | 5804077 - 5804703 | 23191.7 |
| nucleotidyltransferase domain-containing protein | LC55x_RS23390 | Not Available | Negative | 5804869 - 5805693 | 30817.5 |
| gnat family n-acetyltransferase | LC55x_RS23395 | Not Available | Positive | 5805826 - 5806335 | 18764.6 |
| yiix family permuted papain-like enzyme | LC55x_RS23400 | Not Available | Positive | 5806360 - 5806941 | 21114.6 |
| duf938 domain-containing protein | LC55x_RS23405 | Not Available | Negative | 5807356 - 5807988 | 22503.8 |
| hsp70 family protein | LC55x_RS23410 | Not Available | Negative | 5808052 - 5809500 | 51286.6 |
| ycxb family protein | LC55x_RS26430 | Not Available | Negative | 5809782 - 5810276 | 18509.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
