Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ecf-type sigma factor | LC55x_RS23175 | Not Available | Positive | 5749013 - 5749585 | 21398.5 |
| serine/threonine-protein kinase | LC55x_RS23180 | Not Available | Positive | 5749723 - 5752545 | 104046.0 |
| dinb family protein | LC55x_RS23185 | Not Available | Negative | 5752585 - 5753127 | 19782.7 |
| translocation/assembly module tamb domain-containing protein | LC55x_RS23190 | Not Available | Negative | 5753241 - 5757131 | 137822.0 |
| autotransporter assembly complex family protein | LC55x_RS23195 | Not Available | Negative | 5757162 - 5759156 | 72525.5 |
| tonb-dependent siderophore receptor | LC55x_RS23200 | Not Available | Positive | 5759822 - 5762611 | 102009.0 |
| hypothetical protein | LC55x_RS27390 | Not Available | Positive | 5762929 - 5763141 | 7806.55 |
| glycine--trna ligase subunit beta | LC55x_RS23205 | Not Available | Negative | 5763809 - 5765980 | 78086.3 |
| glycine--trna ligase subunit alpha | LC55x_RS23210 | Not Available | Negative | 5766135 - 5767070 | 35329.8 |
| glutamine amidotransferase | LC55x_RS23215 | Not Available | Positive | 5767187 - 5767912 | 25955.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
