Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trimeric intracellular cation channel family protein | LC55x_RS23130 | Not Available | Negative | 5739388 - 5739993 | 21754.5 |
| abc transporter atp-binding protein | LC55x_RS23135 | Not Available | Negative | 5740844 - 5741587 | 26576.5 |
| hypothetical protein | LC55x_RS27965 | Not Available | Negative | 5741584 - 5742582 | 35258.4 |
| hypothetical protein | LC55x_RS23145 | Not Available | Positive | 5742704 - 5743126 | 15983.7 |
| kanamycin nucleotidyltransferase c-terminal domain-containing protein | LC55x_RS23150 | Not Available | Negative | 5743202 - 5744008 | 29433.5 |
| hypothetical protein | LC55x_RS23155 | Not Available | Negative | 5744157 - 5744495 | 12514.7 |
| hypothetical protein | LC55x_RS27970 | Not Available | Negative | 5744692 - 5744862 | 6046.39 |
| fatty acid desaturase | LC55x_RS23160 | Not Available | Negative | 5745285 - 5746490 | 45864.2 |
| chad domain-containing protein | LC55x_RS23165 | Not Available | Negative | 5746788 - 5747753 | 34754.1 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | LC55x_RS23170 | Not Available | Positive | 5747825 - 5748637 | 29820.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
