Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing hybrid sensor histidine kinase/response regulator | LC55x_RS23080 | Not Available | Positive | 5725748 - 5729245 | 126822.0 |
| duf2167 domain-containing protein | LC55x_RS23085 | Not Available | Positive | 5729441 - 5730316 | 31576.3 |
| hypothetical protein | LC55x_RS23090 | Not Available | Positive | 5730313 - 5731023 | 26585.8 |
| j domain-containing protein | LC55x_RS23095 | Not Available | Positive | 5731020 - 5731337 | 11632.8 |
| response regulator transcription factor | LC55x_RS23100 | Not Available | Negative | 5731422 - 5732090 | 23487.3 |
| endonuclease domain-containing protein | LC55x_RS23105 | Not Available | Positive | 5732234 - 5732599 | 13926.0 |
| acetate--coa ligase | LC55x_RS23110 | Not Available | Negative | 5732841 - 5734793 | 71851.2 |
| dcap family trimeric outer membrane transporter | LC55x_RS23115 | Not Available | Positive | 5735165 - 5736577 | 50655.4 |
| mfs transporter | LC55x_RS23120 | Not Available | Positive | 5736844 - 5738508 | 59276.9 |
| uracil-dna glycosylase family protein | LC55x_RS23125 | Not Available | Positive | 5738715 - 5739326 | 22488.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
