Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| para family protein | LC55x_RS23030 | Not Available | Positive | 5716500 - 5717318 | 29050.9 |
| parb/repb/spo0j family partition protein | LC55x_RS23035 | Not Available | Positive | 5717315 - 5718232 | 32972.9 |
| hypothetical protein | LC55x_RS23040 | Not Available | Positive | 5718619 - 5719050 | 15693.8 |
| nad-dependent epimerase/dehydratase family protein | LC55x_RS23045 | Not Available | Positive | 5719353 - 5720318 | 35463.0 |
| glycosyltransferase family 2 protein | LC55x_RS23050 | Not Available | Positive | 5720644 - 5721369 | 26905.3 |
| lipid-a-disaccharide synthase n-terminal domain-containing protein | LC55x_RS23055 | Not Available | Positive | 5721380 - 5721715 | 12826.7 |
| gfa family protein | LC55x_RS23060 | Not Available | Negative | 5721740 - 5722135 | 14465.1 |
| 50s ribosomal protein l28 | LC55x_RS23065 | Not Available | Positive | 5722468 - 5722704 | 9037.97 |
| 50s ribosomal protein l33 | LC55x_RS23070 | Not Available | Positive | 5722718 - 5722882 | 6307.77 |
| serine protease | LC55x_RS23075 | Not Available | Negative | 5723986 - 5725230 | 43320.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
