Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rdd family protein | LC55x_RS22980 | Not Available | Negative | 5705528 - 5706040 | 18931.6 |
| gamma carbonic anhydrase family protein | LC55x_RS22985 | Not Available | Negative | 5706108 - 5706650 | 19034.0 |
| coniferyl aldehyde dehydrogenase | LC55x_RS22990 | Not Available | Positive | 5706937 - 5708364 | 52295.0 |
| hypothetical protein | LC55x_RS22995 | Not Available | Positive | 5708867 - 5710129 | 45444.8 |
| hypothetical protein | LC55x_RS23000 | Not Available | Positive | 5710126 - 5711373 | 44151.1 |
| exodeoxyribonuclease iii | LC55x_RS23005 | Not Available | Positive | 5711402 - 5712172 | 28984.1 |
| glsb/yeaq/ymge family stress response membrane protein | LC55x_RS23010 | Not Available | Negative | 5712605 - 5712880 | 9305.98 |
| amp-binding protein | LC55x_RS23015 | Not Available | Negative | 5713215 - 5714615 | 49807.0 |
| 4'-phosphopantetheinyl transferase superfamily protein | LC55x_RS23020 | Not Available | Positive | 5714834 - 5715457 | 23241.4 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | LC55x_RS23025 | Not Available | Positive | 5715645 - 5716310 | 23486.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
