Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LC55x_RS22660 | Not Available | Positive | 5620468 - 5621487 | 37575.4 |
| tigr00645 family protein | LC55x_RS22665 | Not Available | Negative | 5621625 - 5622269 | 23001.6 |
| glutathione binding-like protein | LC55x_RS22670 | Not Available | Positive | 5622501 - 5623211 | 26705.4 |
| s9 family peptidase | LC55x_RS22675 | Not Available | Positive | 5623285 - 5625492 | 81131.6 |
| duf885 domain-containing protein | LC55x_RS22680 | Not Available | Positive | 5625753 - 5627591 | 68000.8 |
| serine hydrolase | LC55x_RS22685 | Not Available | Negative | 5628482 - 5630458 | 71440.8 |
| hypothetical protein | LC55x_RS27945 | Not Available | Positive | 5630400 - 5631314 | 28415.3 |
| hypothetical protein | LC55x_RS27350 | Not Available | Positive | 5631403 - 5631603 | 6869.41 |
| helix-turn-helix domain-containing protein | LC55x_RS22695 | Not Available | Positive | 5631633 - 5632343 | 25497.3 |
| jmjc domain-containing protein | LC55x_RS22700 | Not Available | Negative | 5632512 - 5633834 | 49224.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
