Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-c domain-containing protein | LC55x_RS22220 | Not Available | Negative | 5483276 - 5483818 | 20503.8 |
| rna polymerase sigma factor rpoh | LC55x_RS22225 | Not Available | Negative | 5484229 - 5485107 | 32910.0 |
| n-acetylmannosamine-6-phosphate 2-epimerase | LC55x_RS22230 | Not Available | Negative | 5485629 - 5486324 | 24393.6 |
| hypothetical protein | LC55x_RS22235 | Not Available | Negative | 5486321 - 5486674 | 13854.2 |
| peptidogalycan biosysnthesis protein | LC55x_RS22240 | Not Available | Negative | 5486695 - 5487861 | 43017.6 |
| class i sam-dependent methyltransferase | LC55x_RS22245 | Not Available | Negative | 5487866 - 5488618 | 27736.0 |
| carbohydrate binding family 9 domain-containing protein | LC55x_RS22250 | Not Available | Negative | 5488883 - 5491105 | 84334.3 |
| glycosyltransferase family 87 protein | LC55x_RS22255 | Not Available | Negative | 5491105 - 5492673 | 56656.1 |
| had family hydrolase | LC55x_RS22260 | Not Available | Negative | 5492797 - 5493555 | 28324.8 |
| glycosyltransferase 87 family protein | LC55x_RS22265 | Not Available | Negative | 5493552 - 5495630 | 76843.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
