Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase i | LC55x_RS22075 | Not Available | Positive | 5448011 - 5450530 | 92933.9 |
| lytic polysaccharide monooxygenase | LC55x_RS22080 | Not Available | Positive | 5450920 - 5451915 | 36413.1 |
| lytic polysaccharide monooxygenase | LC55x_RS22085 | Not Available | Positive | 5452285 - 5453376 | 39200.6 |
| sua5/ycio/yrdc/ywlc family protein | LC55x_RS22090 | Not Available | Positive | 5453471 - 5454031 | 19407.3 |
| eama family transporter | LC55x_RS22095 | Not Available | Positive | 5454089 - 5454535 | 15794.8 |
| duf4124 domain-containing protein | LC55x_RS22100 | Not Available | Positive | 5454640 - 5455458 | 29347.4 |
| duf4124 domain-containing protein | LC55x_RS22105 | Not Available | Positive | 5455458 - 5456129 | 23694.1 |
| hypothetical protein | LC55x_RS22110 | Not Available | Positive | 5456238 - 5456846 | 21999.2 |
| hypothetical protein | LC55x_RS22115 | Not Available | Negative | 5456859 - 5457440 | 20531.3 |
| sdr family oxidoreductase | LC55x_RS22120 | Not Available | Negative | 5457451 - 5458227 | 28221.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
