Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase | LC55x_RS22025 | Not Available | Negative | 5435679 - 5437007 | 47528.1 |
| glycosyltransferase family 39 protein | LC55x_RS22030 | Not Available | Negative | 5437012 - 5438778 | 65273.9 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | LC55x_RS22035 | Not Available | Negative | 5438855 - 5440471 | 56880.9 |
| methionyl-trna formyltransferase | LC55x_RS22040 | Not Available | Negative | 5440468 - 5441397 | 33152.2 |
| peptide deformylase | LC55x_RS22045 | Not Available | Negative | 5441603 - 5442115 | 19024.1 |
| lysm peptidoglycan-binding domain-containing protein | LC55x_RS22050 | Not Available | Positive | 5442275 - 5443429 | 42776.1 |
| dna-processing protein dpra | LC55x_RS22055 | Not Available | Positive | 5443530 - 5444762 | 43222.3 |
| duf494 family protein | LC55x_RS22060 | Not Available | Positive | 5444852 - 5445340 | 18500.9 |
| pilin | LC55x_RS22065 | Not Available | Positive | 5445673 - 5446482 | 28486.6 |
| rdd family protein | LC55x_RS22070 | Not Available | Positive | 5446596 - 5447738 | 40605.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
