Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | LC55x_RS21975 | Not Available | Positive | 5425925 - 5426290 | 13486.9 |
| hypothetical protein | LC55x_RS21980 | Not Available | Negative | 5426444 - 5426920 | 16533.5 |
| hypothetical protein | LC55x_RS21985 | Not Available | Negative | 5427074 - 5427574 | 18027.4 |
| rna polymerase sigma factor rpod | LC55x_RS21990 | Not Available | Negative | 5427712 - 5429577 | 69747.2 |
| d-aminoacyl-trna deacylase | LC55x_RS21995 | Not Available | Negative | 5429704 - 5430144 | 15134.3 |
| lauroyl acyltransferase | LC55x_RS22000 | Not Available | Positive | 5430277 - 5431197 | 34057.8 |
| ph domain-containing protein | LC55x_RS22005 | Not Available | Positive | 5431360 - 5431929 | 20565.4 |
| ph domain-containing protein | LC55x_RS22010 | Not Available | Positive | 5432049 - 5433488 | 54087.2 |
| udp-n-acetylglucosamine 2-epimerase | LC55x_RS22015 | Not Available | Negative | 5433578 - 5434606 | 39301.7 |
| glycosyltransferase family 2 protein | LC55x_RS22020 | Not Available | Negative | 5434609 - 5435424 | 31252.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
