Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| h-ns family nucleoid-associated regulatory protein | LC55x_RS26405 | Not Available | Positive | 5413631 - 5413870 | 9159.92 |
| hypothetical protein | LC55x_RS21930 | Not Available | Positive | 5414141 - 5414737 | 21582.2 |
| hypothetical protein | LC55x_RS21935 | Not Available | Negative | 5414798 - 5415982 | 42471.8 |
| Trna-met | Not Available | Not Available | Positive | 5416496 - 5416571 | Not Available |
| gh92 family glycosyl hydrolase | LC55x_RS21945 | Not Available | Negative | 5416783 - 5419095 | 85519.4 |
| laci family dna-binding transcriptional regulator | LC55x_RS21950 | Not Available | Positive | 5419419 - 5420471 | 37626.8 |
| sugar mfs transporter | LC55x_RS21955 | Not Available | Positive | 5420468 - 5421766 | 46288.4 |
| carbohydrate kinase | LC55x_RS21960 | Not Available | Positive | 5421766 - 5422803 | 36744.7 |
| age family epimerase/isomerase | LC55x_RS21965 | Not Available | Positive | 5422800 - 5424020 | 47229.8 |
| serine hydrolase | LC55x_RS21970 | Not Available | Positive | 5424285 - 5425778 | 53117.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
