Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LC55x_RS21520 | Not Available | Positive | 5319394 - 5319963 | 20924.0 |
| superoxide dismutase | LC55x_RS21525 | Not Available | Positive | 5320002 - 5320634 | 22866.6 |
| zip family metal transporter | LC55x_RS21530 | Not Available | Positive | 5320693 - 5321559 | 29488.7 |
| wg repeat-containing protein | LC55x_RS21535 | Not Available | Negative | 5321618 - 5323753 | 78271.7 |
| hypothetical protein | LC55x_RS27925 | Not Available | Negative | 5323753 - 5324904 | 41359.1 |
| alginate lyase family protein | LC55x_RS21550 | Not Available | Negative | 5325270 - 5326475 | 43346.8 |
| hypothetical protein | LC55x_RS27305 | Not Available | Positive | 5326920 - 5327300 | 13096.6 |
| duf4019 domain-containing protein | LC55x_RS21555 | Not Available | Negative | 5327290 - 5327766 | 17122.4 |
| ompa family protein | LC55x_RS21560 | Not Available | Negative | 5327845 - 5328846 | 36557.1 |
| yada-like family protein | LC55x_RS27310 | Not Available | Negative | 5328843 - 5335076 | 194501.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
