Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xvipcd domain-containing protein | LC55x_RS27295 | Not Available | Negative | 5312075 - 5313562 | 53438.8 |
| hypothetical protein | LC55x_RS27300 | Not Available | Negative | 5313590 - 5314159 | 21302.3 |
| hypothetical protein | LC55x_RS21485 | Not Available | Negative | 5314188 - 5314673 | 18273.2 |
| hypothetical protein | LC55x_RS21490 | Not Available | Negative | 5314831 - 5315238 | 15203.4 |
| metallophosphoesterase | LC55x_RS28410 | Not Available | Negative | 5315370 - 5315957 | 22075.6 |
| hypothetical protein | LC55x_RS28415 | Not Available | Positive | 5316038 - 5316715 | 24695.4 |
| rna polymerase sigma factor | LC55x_RS21500 | Not Available | Positive | 5316730 - 5317317 | 22081.3 |
| hypothetical protein | LC55x_RS21505 | Not Available | Positive | 5317314 - 5317802 | 17373.7 |
| rida family protein | LC55x_RS21510 | Not Available | Negative | 5317821 - 5318231 | 15065.7 |
| lysr family transcriptional regulator | LC55x_RS21515 | Not Available | Positive | 5318377 - 5319303 | 34422.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
