Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane glutamic endopeptidase | LC55x_RS21375 | Not Available | Negative | 5290899 - 5291660 | 27352.8 |
| voc family protein | LC55x_RS21380 | Not Available | Negative | 5291927 - 5292196 | 9999.14 |
| hypothetical protein | LC55x_RS21385 | Not Available | Negative | 5292265 - 5293065 | 30152.8 |
| hypothetical protein | LC55x_RS21390 | Not Available | Negative | 5293433 - 5293648 | 7517.15 |
| tlpa disulfide reductase family protein | LC55x_RS21395 | Not Available | Negative | 5293796 - 5294485 | 24081.5 |
| hypothetical protein | LC55x_RS21400 | Not Available | Positive | 5295033 - 5295692 | 23202.3 |
| acyltransferase | LC55x_RS21405 | Not Available | Positive | 5295993 - 5297270 | 46175.9 |
| ecf-type sigma factor | LC55x_RS21410 | Not Available | Positive | 5297442 - 5298020 | 21551.9 |
| serine/threonine-protein kinase | LC55x_RS21415 | Not Available | Positive | 5298037 - 5300733 | 98318.2 |
| hypothetical protein | LC55x_RS21420 | Not Available | Negative | 5300843 - 5301679 | 30563.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
