Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LC55x_RS27920 | Not Available | Positive | 5278947 - 5279108 | 5697.55 |
| m23 family metallopeptidase | LC55x_RS21330 | Not Available | Positive | 5279254 - 5280480 | 43173.2 |
| gfo/idh/moca family protein | LC55x_RS21335 | Not Available | Negative | 5280556 - 5281911 | 49824.5 |
| amino acid deaminase | LC55x_RS21340 | Not Available | Positive | 5282300 - 5283589 | 47379.9 |
| nuclear transport factor 2 family protein | LC55x_RS21345 | Not Available | Negative | 5283709 - 5284281 | 20828.7 |
| hypothetical protein | LC55x_RS21350 | Not Available | Negative | 5285365 - 5285709 | 11843.8 |
| hypothetical protein | LC55x_RS21355 | Not Available | Positive | 5285927 - 5286166 | 8907.51 |
| plp-dependent aminotransferase family protein | LC55x_RS21360 | Not Available | Positive | 5286213 - 5287715 | 53961.4 |
| diguanylate cyclase | LC55x_RS21365 | Not Available | Negative | 5287732 - 5289408 | 61580.1 |
| d-amino acid dehydrogenase | LC55x_RS21370 | Not Available | Negative | 5289557 - 5290813 | 45683.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
