Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | LC55x_RS21230 | Not Available | Negative | 5253885 - 5256857 | 109308.0 |
| transglutaminase-like domain-containing protein | LC55x_RS21235 | Not Available | Negative | 5256903 - 5258354 | 54812.6 |
| sh3 domain-containing protein | LC55x_RS21240 | Not Available | Positive | 5258785 - 5260188 | 51885.7 |
| dipeptide epimerase | LC55x_RS21245 | Not Available | Positive | 5260311 - 5261417 | 39367.0 |
| murr/rpir family transcriptional regulator | LC55x_RS21250 | Not Available | Positive | 5261494 - 5262342 | 30814.8 |
| l,d-transpeptidase | LC55x_RS21255 | Not Available | Positive | 5262479 - 5263210 | 25855.4 |
| duf885 family protein | LC55x_RS21260 | Not Available | Negative | 5263431 - 5265242 | 68004.9 |
| hypothetical protein | LC55x_RS21265 | Not Available | Negative | 5265503 - 5266714 | 43987.5 |
| c2 family cysteine protease | LC55x_RS21270 | Not Available | Positive | 5267001 - 5268098 | 39187.5 |
| hypothetical protein | LC55x_RS21275 | Not Available | Positive | 5268195 - 5268617 | 15657.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
