Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid a deacylase lpxr family protein | LC55x_RS21180 | Not Available | Negative | 5235462 - 5236523 | 39167.8 |
| duf3224 domain-containing protein | LC55x_RS21185 | Not Available | Negative | 5236918 - 5237319 | 14230.0 |
| tonb-dependent siderophore receptor | LC55x_RS21190 | Not Available | Positive | 5237620 - 5239827 | 80635.8 |
| pepsy domain-containing protein | LC55x_RS21195 | Not Available | Positive | 5239829 - 5241220 | 50828.8 |
| autotransporter domain-containing protein | LC55x_RS21200 | Not Available | Negative | 5241521 - 5248042 | 204330.0 |
| organic hydroperoxide resistance protein | LC55x_RS21205 | Not Available | Negative | 5249026 - 5249451 | 14692.6 |
| marr family winged helix-turn-helix transcriptional regulator | LC55x_RS21210 | Not Available | Negative | 5249591 - 5250064 | 17291.4 |
| serine hydrolase | LC55x_RS21215 | Not Available | Negative | 5250269 - 5251312 | 38477.4 |
| m15 family metallopeptidase | LC55x_RS21220 | Not Available | Negative | 5251468 - 5252295 | 30294.8 |
| serine hydrolase | LC55x_RS21225 | Not Available | Negative | 5252234 - 5253769 | 56902.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
