Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyse family translocator | LC55x_RS21140 | Not Available | Negative | 5222003 - 5222632 | 22301.1 |
| autotransporter domain-containing protein | LC55x_RS28470 | Not Available | Negative | 5223043 - 5223570 | 18684.4 |
| methyltransferase | LC55x_RS21145 | Not Available | Negative | 5223638 - 5226208 | 89882.8 |
| response regulator transcription factor | LC55x_RS21150 | Not Available | Negative | 5226555 - 5227217 | 23650.7 |
| sensor histidine kinase | LC55x_RS21155 | Not Available | Negative | 5227214 - 5228734 | 54994.9 |
| duf418 domain-containing protein | LC55x_RS21160 | Not Available | Positive | 5228863 - 5230071 | 43586.0 |
| hlyd family secretion protein | LC55x_RS21165 | Not Available | Positive | 5230431 - 5231705 | 46940.2 |
| peptidase domain-containing abc transporter | LC55x_RS21170 | Not Available | Positive | 5231702 - 5233858 | 78619.5 |
| hypothetical protein | LC55x_RS27915 | Not Available | Positive | 5233938 - 5234111 | 5869.71 |
| hypothetical protein | LC55x_RS21175 | Not Available | Positive | 5234285 - 5235406 | 41403.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
