Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyttr family dna-binding domain-containing protein | LC55x_RS21040 | Not Available | Negative | 5199551 - 5200285 | 27370.9 |
| sensor histidine kinase | LC55x_RS21045 | Not Available | Negative | 5200306 - 5201292 | 35801.8 |
| alpha/beta hydrolase | LC55x_RS21050 | Not Available | Negative | 5201389 - 5202090 | 25703.9 |
| tonb family protein | LC55x_RS21055 | Not Available | Negative | 5202343 - 5203332 | 33781.1 |
| hypothetical protein | LC55x_RS21060 | Not Available | Positive | 5203675 - 5204091 | 14308.1 |
| tolc family protein | LC55x_RS21065 | Not Available | Positive | 5204220 - 5205542 | 47066.4 |
| efflux rnd transporter periplasmic adaptor subunit | LC55x_RS21070 | Not Available | Positive | 5205539 - 5206546 | 35212.7 |
| efflux rnd transporter permease subunit | LC55x_RS21075 | Not Available | Positive | 5206599 - 5209823 | 115143.0 |
| cation diffusion facilitator family transporter | LC55x_RS21080 | Not Available | Positive | 5209950 - 5210846 | 31784.0 |
| hypothetical protein | LC55x_RS21085 | Not Available | Negative | 5211242 - 5211814 | 20102.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
