Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase xerc | LC55x_RS20940 | Not Available | Negative | 5177835 - 5178719 | 32889.7 |
| tetratricopeptide repeat protein | LC55x_RS20945 | Not Available | Negative | 5178780 - 5179265 | 17903.9 |
| duf484 family protein | LC55x_RS20950 | Not Available | Negative | 5179300 - 5179986 | 25624.5 |
| diaminopimelate epimerase | LC55x_RS20955 | Not Available | Negative | 5179983 - 5180885 | 31280.7 |
| lps translocon maturation chaperone lptm | LC55x_RS20960 | Not Available | Negative | 5180890 - 5181249 | 11965.0 |
| tautomerase family protein | LC55x_RS20965 | Not Available | Positive | 5181484 - 5181702 | 8093.74 |
| yban family protein | LC55x_RS20970 | Not Available | Negative | 5181806 - 5182303 | 17817.8 |
| s9 family peptidase | LC55x_RS20975 | Not Available | Negative | 5183331 - 5185481 | 80905.6 |
| prolyl oligopeptidase family protein | LC55x_RS20980 | Not Available | Negative | 5185635 - 5187758 | 78395.5 |
| hypothetical protein | LC55x_RS20985 | Not Available | Negative | 5188219 - 5188572 | 12716.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
