Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m1 family metallopeptidase | LC55x_RS20890 | Not Available | Negative | 5166860 - 5168827 | 72049.4 |
| sdr family nad(p)-dependent oxidoreductase | LC55x_RS20895 | Not Available | Positive | 5169233 - 5169976 | 24997.8 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | LC55x_RS20900 | Not Available | Negative | 5170552 - 5171313 | 28587.2 |
| gnat family n-acetyltransferase | LC55x_RS20905 | Not Available | Positive | 5171543 - 5172025 | 17703.1 |
| nucleoside deaminase | LC55x_RS20910 | Not Available | Positive | 5172481 - 5172936 | 16436.4 |
| gnat family n-acetyltransferase | LC55x_RS20915 | Not Available | Positive | 5173052 - 5173519 | 17476.0 |
| duf2269 domain-containing protein | LC55x_RS20920 | Not Available | Negative | 5173527 - 5173991 | 17436.0 |
| sdr family oxidoreductase | LC55x_RS20925 | Not Available | Negative | 5173996 - 5175312 | 47116.3 |
| atp-dependent protease atpase subunit hslu | LC55x_RS20930 | Not Available | Negative | 5175563 - 5176909 | 49818.6 |
| atp-dependent protease subunit hslv | LC55x_RS20935 | Not Available | Negative | 5177050 - 5177601 | 19486.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
