Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein roda | LC55x_RS20835 | Not Available | Negative | 5153862 - 5154977 | 40513.9 |
| penicillin-binding protein 2 | LC55x_RS20840 | Not Available | Negative | 5154974 - 5157241 | 82122.9 |
| rod shape-determining protein mred | LC55x_RS20845 | Not Available | Negative | 5157243 - 5157728 | 18151.0 |
| rod shape-determining protein mrec | LC55x_RS20850 | Not Available | Negative | 5157725 - 5158993 | 43301.5 |
| rod shape-determining protein | LC55x_RS20855 | Not Available | Negative | 5159168 - 5160214 | 37454.5 |
| carbohydrate kinase family protein | LC55x_RS20860 | Not Available | Positive | 5160578 - 5161510 | 35123.7 |
| hypothetical protein | LC55x_RS20865 | Not Available | Positive | 5161889 - 5163454 | 57030.7 |
| gh25 family lysozyme | LC55x_RS20870 | Not Available | Negative | 5163563 - 5164330 | 28163.4 |
| hypothetical protein | LC55x_RS20880 | Not Available | Negative | 5165132 - 5165863 | 26711.9 |
| alpha/beta fold hydrolase | LC55x_RS20885 | Not Available | Negative | 5165860 - 5166837 | 36130.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
