Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylcobalamin-dependent ribonucleoside-diphosphate reductase | LC55x_RS20535 | Not Available | Negative | 5089823 - 5091976 | 80674.6 |
| do family serine endopeptidase | LC55x_RS20540 | Not Available | Positive | 5092783 - 5094216 | 49404.2 |
| hypothetical protein | LC55x_RS20545 | Not Available | Positive | 5094484 - 5094846 | 11933.1 |
| membrane protein | LC55x_RS20550 | Not Available | Positive | 5094867 - 5095397 | 18401.9 |
| hypothetical protein | LC55x_RS27910 | Not Available | Positive | 5095394 - 5095777 | 13531.1 |
| ai-2e family transporter | LC55x_RS20560 | Not Available | Positive | 5096370 - 5097395 | 37112.2 |
| endonuclease v | LC55x_RS20565 | Not Available | Positive | 5097531 - 5098061 | 18856.6 |
| had family hydrolase | LC55x_RS20570 | Not Available | Positive | 5098260 - 5098976 | 26730.7 |
| m17 family metallopeptidase | LC55x_RS20575 | Not Available | Positive | 5098973 - 5100355 | 49566.0 |
| nucleoside 2-deoxyribosyltransferase domain-containing protein | LC55x_RS20580 | Not Available | Positive | 5100491 - 5101069 | 20713.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
