Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde oxidoreductase molybdenum-binding subunit paoc | LC55x_RS20490 | Not Available | Negative | 5080976 - 5083174 | 77312.9 |
| xanthine dehydrogenase family protein subunit m | LC55x_RS20495 | Not Available | Negative | 5083179 - 5084129 | 33508.1 |
| aldehyde dehydrogenase iron-sulfur subunit paoa | LC55x_RS20500 | Not Available | Negative | 5084126 - 5084767 | 22384.2 |
| hypothetical protein | LC55x_RS27270 | Not Available | Negative | 5084945 - 5085157 | 7391.8 |
| gfa family protein | LC55x_RS20505 | Not Available | Positive | 5085274 - 5085666 | 14553.3 |
| l,d-transpeptidase | LC55x_RS20510 | Not Available | Positive | 5085976 - 5086938 | 33913.2 |
| m23 family metallopeptidase | LC55x_RS20515 | Not Available | Positive | 5086942 - 5087625 | 23778.2 |
| methyltransferase | LC55x_RS20520 | Not Available | Positive | 5087755 - 5087955 | 7885.22 |
| nrdjb | LC55x_RS20525 | Not Available | Negative | 5088127 - 5088915 | 28615.5 |
| hypothetical protein | LC55x_RS20530 | Not Available | Negative | 5089052 - 5089555 | 16821.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
