Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | LC55x_RS20440 | Not Available | Negative | 5070315 - 5070761 | 16701.1 |
| atp-binding protein | LC55x_RS20445 | Not Available | Negative | 5070754 - 5072568 | 67710.8 |
| dna-formamidopyrimidine glycosylase family protein | LC55x_RS20450 | Not Available | Negative | 5072840 - 5073577 | 28133.1 |
| duf72 domain-containing protein | LC55x_RS20455 | Not Available | Positive | 5073679 - 5074452 | 27790.8 |
| nad(p)/fad-dependent oxidoreductase | LC55x_RS20460 | Not Available | Positive | 5074529 - 5075443 | 32175.0 |
| hypothetical protein | LC55x_RS20465 | Not Available | Negative | 5075459 - 5075836 | 13779.4 |
| serine hydrolase | LC55x_RS20470 | Not Available | Negative | 5076043 - 5077269 | 44130.4 |
| rna polymerase sigma factor | LC55x_RS20475 | Not Available | Positive | 5077488 - 5078003 | 19320.1 |
| hypothetical protein | LC55x_RS20480 | Not Available | Positive | 5078000 - 5078773 | 28399.1 |
| delta-60 repeat domain-containing protein | LC55x_RS20485 | Not Available | Negative | 5078884 - 5080143 | 41272.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
