Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s8/s53 family peptidase | LC55x_RS20390 | Not Available | Positive | 5053074 - 5054678 | 56631.6 |
| serine protease | LC55x_RS20395 | Not Available | Positive | 5054837 - 5055865 | 36638.4 |
| serine protease | LC55x_RS20400 | Not Available | Positive | 5055876 - 5057993 | 77991.2 |
| hypothetical protein | LC55x_RS20405 | Not Available | Positive | 5057986 - 5061339 | 125090.0 |
| nhl repeat-containing protein | LC55x_RS20410 | Not Available | Positive | 5061495 - 5063597 | 74288.8 |
| pa2169 family four-helix-bundle protein | LC55x_RS20415 | Not Available | Negative | 5063723 - 5064178 | 16507.5 |
| ligase-associated dna damage response exonuclease | LC55x_RS20420 | Not Available | Positive | 5064529 - 5065527 | 36953.6 |
| atp-dependent dna ligase | LC55x_RS20425 | Not Available | Positive | 5065524 - 5067134 | 60735.6 |
| excinuclease abc subunit uvra | LC55x_RS20430 | Not Available | Negative | 5067150 - 5069789 | 94826.9 |
| response regulator | LC55x_RS20435 | Not Available | Negative | 5069885 - 5070307 | 15393.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
