Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LC55x_RS20045 | Not Available | Positive | 4981083 - 4981586 | 17174.8 |
| pqq-dependent sugar dehydrogenase | LC55x_RS20050 | Not Available | Positive | 4981944 - 4983107 | 41367.9 |
| lytic transglycosylase domain-containing protein | LC55x_RS20055 | Not Available | Negative | 4983271 - 4984053 | 27928.5 |
| apc family permease | LC55x_RS20065 | Not Available | Positive | 4984530 - 4985792 | 43419.1 |
| nadph-dependent fmn reductase | LC55x_RS20070 | Not Available | Positive | 4985923 - 4986498 | 21460.6 |
| rida family protein | LC55x_RS20075 | Not Available | Positive | 4986495 - 4987001 | 18172.6 |
| n-acetylmuramoyl-l-alanine amidase | LC55x_RS20080 | Not Available | Negative | 4987101 - 4987904 | 29289.6 |
| hypothetical protein | LC55x_RS20085 | Not Available | Positive | 4988346 - 4988537 | 6506.77 |
| hypothetical protein | LC55x_RS20090 | Not Available | Negative | 4988642 - 4989121 | 17828.1 |
| hypothetical protein | LC55x_RS20095 | Not Available | Negative | 4989259 - 4989744 | 18095.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
