Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LC55x_RS28405 | Not Available | Negative | 4957903 - 4958253 | 13112.2 |
| arginine deiminase-related protein | LC55x_RS19950 | Not Available | Negative | 4958444 - 4959370 | 31970.9 |
| trna dihydrouridine(20/20a) synthase dusa | LC55x_RS19955 | Not Available | Negative | 4959387 - 4960400 | 37058.7 |
| duf11 domain-containing protein | LC55x_RS19960 | Not Available | Positive | 4960620 - 4962668 | 67360.1 |
| rna 3'-terminal phosphate cyclase | LC55x_RS19965 | Not Available | Negative | 4962729 - 4963751 | 36395.9 |
| rtcb family protein | LC55x_RS19970 | Not Available | Negative | 4963886 - 4965127 | 45354.2 |
| trove domain-containing protein | LC55x_RS19975 | Not Available | Negative | 4966033 - 4967583 | 56165.7 |
| rna repair transcriptional activator rtcr | LC55x_RS19980 | Not Available | Positive | 4967762 - 4969354 | 60337.9 |
| ycao-like family protein | LC55x_RS19985 | Not Available | Negative | 4969376 - 4970647 | 46904.7 |
| hypothetical protein | LC55x_RS19990 | Not Available | Negative | 4970733 - 4970912 | 6463.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
