Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide mfs transporter | LC55x_RS19795 | Not Available | Negative | 4921633 - 4923174 | 55688.4 |
| tryptophan 2,3-dioxygenase | LC55x_RS19800 | Not Available | Negative | 4923685 - 4924623 | 35533.4 |
| lamin tail domain-containing protein | LC55x_RS19805 | Not Available | Positive | 4924819 - 4928400 | 124744.0 |
| lamin tail domain-containing protein | LC55x_RS19810 | Not Available | Positive | 4928666 - 4932157 | 119206.0 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | LC55x_RS19815 | Not Available | Positive | 4932991 - 4934064 | 39142.6 |
| alpha-ketoacid dehydrogenase subunit beta | LC55x_RS19820 | Not Available | Positive | 4934061 - 4935092 | 37085.7 |
| sh3 domain-containing protein | LC55x_RS19825 | Not Available | Positive | 4935094 - 4935447 | 13435.6 |
| dihydrolipoamide acetyltransferase family protein | LC55x_RS19830 | Not Available | Positive | 4935488 - 4936858 | 47050.1 |
| m23 family metallopeptidase | LC55x_RS19835 | Not Available | Positive | 4937128 - 4937925 | 27219.6 |
| m23 family metallopeptidase | LC55x_RS19840 | Not Available | Positive | 4938098 - 4938934 | 29244.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
