Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydch family protein | LC55x_RS19555 | Not Available | Negative | 4867401 - 4867616 | 8381.08 |
| hypothetical protein | LC55x_RS19560 | Not Available | Negative | 4868244 - 4868885 | 23546.9 |
| duf4398 domain-containing protein | LC55x_RS19565 | Not Available | Negative | 4868882 - 4869262 | 13092.3 |
| pilt/pilu family type 4a pilus atpase | LC55x_RS19570 | Not Available | Positive | 4869361 - 4870476 | 41142.0 |
| maleylacetoacetate isomerase | LC55x_RS19575 | Not Available | Negative | 4870684 - 4871346 | 24992.9 |
| fumarylacetoacetate hydrolase family protein | LC55x_RS19580 | Not Available | Negative | 4871441 - 4872427 | 35244.6 |
| peptidoglycan dd-metalloendopeptidase family protein | LC55x_RS19585 | Not Available | Positive | 4872919 - 4874898 | 71210.5 |
| protein kinase domain-containing protein | LC55x_RS19590 | Not Available | Negative | 4875512 - 4878295 | 102807.0 |
| ecf-type sigma factor | LC55x_RS27880 | Not Available | Negative | 4878344 - 4878895 | 20190.2 |
| gnat family n-acetyltransferase | LC55x_RS19600 | Not Available | Positive | 4879228 - 4879722 | 18172.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
