Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type transport auxiliary lipoprotein family protein | LC55x_RS19405 | Not Available | Positive | 4827304 - 4828020 | 25456.2 |
| family 16 glycosylhydrolase | LC55x_RS19410 | Not Available | Positive | 4828218 - 4829405 | 43669.7 |
| alpha-ketoglutarate-dependent dioxygenase alkb | LC55x_RS19415 | Not Available | Negative | 4829727 - 4830317 | 22287.4 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | LC55x_RS19420 | Not Available | Positive | 4830556 - 4832208 | 59696.3 |
| fg-gap-like repeat-containing protein | LC55x_RS19425 | Not Available | Negative | 4832298 - 4834655 | 82584.9 |
| coa transferase subunit b | LC55x_RS19430 | Not Available | Negative | 4834817 - 4835449 | 22288.9 |
| coa transferase subunit a | LC55x_RS19435 | Not Available | Negative | 4835632 - 4836369 | 25933.1 |
| rimk family alpha-l-glutamate ligase | LC55x_RS19440 | Not Available | Positive | 4836487 - 4837398 | 33606.8 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | LC55x_RS19445 | Not Available | Negative | 4837572 - 4838984 | 51691.2 |
| d-hexose-6-phosphate mutarotase | LC55x_RS19450 | Not Available | Positive | 4839134 - 4839961 | 30335.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
