Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine-phosphate kinase | LC55x_RS19105 | Not Available | Negative | 4760697 - 4761704 | 34642.2 |
| transcription antitermination factor nusb | LC55x_RS19110 | Not Available | Negative | 4761789 - 4762250 | 17494.6 |
| 6,7-dimethyl-8-ribityllumazine synthase | LC55x_RS19115 | Not Available | Negative | 4762247 - 4762714 | 16412.5 |
| phytanoyl-coa dioxygenase family protein | LC55x_RS19120 | Not Available | Negative | 4762718 - 4763617 | 33770.3 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | LC55x_RS19125 | Not Available | Negative | 4763689 - 4764819 | 40641.6 |
| riboflavin synthase | LC55x_RS19130 | Not Available | Negative | 4764816 - 4765427 | 21456.6 |
| class i sam-dependent methyltransferase | LC55x_RS19135 | Not Available | Negative | 4766313 - 4767089 | 28496.5 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | LC55x_RS19140 | Not Available | Negative | 4767248 - 4768348 | 38824.6 |
| hypothetical protein | LC55x_RS19145 | Not Available | Negative | 4768345 - 4769178 | 29280.2 |
| hypothetical protein | LC55x_RS19150 | Not Available | Negative | 4769169 - 4769654 | 18934.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
