Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent chaperone clpb | LC55x_RS18865 | Not Available | Negative | 4701788 - 4704373 | 94980.3 |
| ompa family protein | LC55x_RS18870 | Not Available | Positive | 4704793 - 4706139 | 46924.2 |
| lactoylglutathione lyase | LC55x_RS18875 | Not Available | Negative | 4706251 - 4706781 | 19794.5 |
| hypothetical protein | LC55x_RS18880 | Not Available | Negative | 4706837 - 4708423 | 55590.5 |
| hypothetical protein | LC55x_RS27870 | Not Available | Negative | 4708524 - 4708694 | 5833.07 |
| duf4166 domain-containing protein | LC55x_RS18885 | Not Available | Negative | 4709170 - 4709748 | 21080.3 |
| hypothetical protein | LC55x_RS18890 | Not Available | Negative | 4709759 - 4710574 | 29719.6 |
| peptidoglycan editing factor pgef | LC55x_RS18895 | Not Available | Negative | 4710643 - 4711428 | 27928.9 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | LC55x_RS18900 | Not Available | Negative | 4711425 - 4712399 | 35215.2 |
| outer membrane protein assembly factor bamd | LC55x_RS18905 | Not Available | Positive | 4712579 - 4713484 | 34351.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
