Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ynfa family protein | LC55x_RS18370 | Not Available | Negative | 4564618 - 4564944 | 11909.0 |
| nucleoside triphosphate pyrophosphohydrolase | LC55x_RS18375 | Not Available | Negative | 4564964 - 4565803 | 30779.3 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | LC55x_RS18380 | Not Available | Negative | 4565796 - 4566626 | 29889.4 |
| methyltransferase | LC55x_RS18385 | Not Available | Negative | 4566713 - 4567258 | 20596.6 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | LC55x_RS18390 | Not Available | Positive | 4567351 - 4568751 | 50953.0 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | LC55x_RS18395 | Not Available | Positive | 4568742 - 4569479 | 26457.9 |
| chemotaxis protein chex | LC55x_RS18400 | Not Available | Negative | 4570871 - 4571332 | 16676.6 |
| response regulator | LC55x_RS18405 | Not Available | Negative | 4571329 - 4571694 | 13201.2 |
| atp-binding protein | LC55x_RS18410 | Not Available | Negative | 4571707 - 4573878 | 78969.7 |
| opro/oprp family phosphate-selective porin | LC55x_RS18415 | Not Available | Negative | 4574037 - 4575197 | 42850.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
