Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps assembly protein lptd | LC55x_RS18220 | Not Available | Positive | 4534253 - 4536808 | 96531.5 |
| peptidylprolyl isomerase | LC55x_RS18225 | Not Available | Positive | 4536805 - 4538175 | 49440.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | LC55x_RS18230 | Not Available | Positive | 4538177 - 4539169 | 34552.0 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | LC55x_RS18235 | Not Available | Positive | 4539166 - 4540026 | 31097.5 |
| co2+/mg2+ efflux protein apag | LC55x_RS18240 | Not Available | Positive | 4540309 - 4540695 | 14433.7 |
| symmetrical bis(5'-nucleosyl)-tetraphosphatase | LC55x_RS18245 | Not Available | Positive | 4540709 - 4541572 | 32712.5 |
| duf1287 domain-containing protein | LC55x_RS18250 | Not Available | Positive | 4541733 - 4542377 | 23701.2 |
| hypothetical protein | LC55x_RS18255 | Not Available | Positive | 4542488 - 4543021 | 18793.5 |
| dihydrofolate reductase | LC55x_RS18260 | Not Available | Negative | 4543033 - 4543539 | 18708.4 |
| duf3828 domain-containing protein | LC55x_RS18265 | Not Available | Negative | 4543584 - 4544258 | 24610.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
