Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | LC55x_RS18125 | Not Available | Positive | 4513343 - 4514299 | 35591.5 |
| dj-1/pfpi family protein | LC55x_RS18130 | Not Available | Positive | 4514583 - 4515155 | 19781.7 |
| peptide-methionine (s)-s-oxide reductase msra | LC55x_RS18135 | Not Available | Negative | 4515383 - 4516033 | 23732.9 |
| peptide-n4-asparagine amidase | LC55x_RS18140 | Not Available | Positive | 4516273 - 4517922 | 59970.3 |
| dmt family transporter | LC55x_RS18145 | Not Available | Negative | 4518718 - 4519653 | 33234.8 |
| duf2007 domain-containing protein | LC55x_RS18150 | Not Available | Negative | 4519903 - 4520184 | 9720.72 |
| glutamine--trna ligase/yqey domain fusion protein | LC55x_RS18155 | Not Available | Positive | 4520400 - 4522148 | 65556.1 |
| nucleoside deaminase | LC55x_RS18160 | Not Available | Positive | 4522166 - 4522720 | 19808.8 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | LC55x_RS18165 | Not Available | Positive | 4522858 - 4523928 | 40139.2 |
| hypothetical protein | LC55x_RS18170 | Not Available | Positive | 4524129 - 4524875 | 25412.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
