Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | LC55x_RS17420 | Not Available | Negative | 4363335 - 4363841 | 18074.4 |
| translational gtpase typa | LC55x_RS17425 | Not Available | Positive | 4364305 - 4366134 | 67274.0 |
| hypothetical protein | LC55x_RS17430 | Not Available | Positive | 4366210 - 4366746 | 19084.1 |
| duf2127 domain-containing protein | LC55x_RS17435 | Not Available | Positive | 4366743 - 4367216 | 17209.2 |
| pyrroloquinoline quinone biosynthesis protein pqqb | LC55x_RS17445 | Not Available | Positive | 4367821 - 4368750 | 34053.4 |
| pyrroloquinoline-quinone synthase pqqc | LC55x_RS17450 | Not Available | Positive | 4368786 - 4369532 | 28112.6 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | LC55x_RS17455 | Not Available | Positive | 4369529 - 4369825 | 10698.8 |
| pyrroloquinoline quinone biosynthesis protein pqqe | LC55x_RS17460 | Not Available | Positive | 4369822 - 4370997 | 42989.4 |
| hypothetical protein | LC55x_RS17465 | Not Available | Negative | 4371028 - 4371393 | 13612.0 |
| amidase | LC55x_RS17470 | Not Available | Positive | 4371613 - 4373253 | 56674.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
