Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine c-acetyltransferase | LC55x_RS17220 | Not Available | Positive | 4303748 - 4304941 | 42954.7 |
| hypothetical protein | LC55x_RS17225 | Not Available | Positive | 4305053 - 4305442 | 13983.5 |
| pseudouridine synthase | LC55x_RS17230 | Not Available | Negative | 4305774 - 4306526 | 27030.5 |
| hypothetical protein | LC55x_RS17235 | Not Available | Negative | 4306823 - 4307347 | 17945.6 |
| ompa family protein | LC55x_RS17240 | Not Available | Negative | 4307610 - 4308689 | 39041.6 |
| ompa family protein | LC55x_RS17245 | Not Available | Negative | 4309150 - 4310229 | 38981.5 |
| bifunctional 2-methylcitrate dehydratase/aconitate hydratase | LC55x_RS17250 | Not Available | Negative | 4310489 - 4311946 | 53489.9 |
| class iii extradiol ring-cleavage dioxygenase | LC55x_RS17255 | Not Available | Positive | 4312179 - 4312970 | 28871.6 |
| lysr family transcriptional regulator | LC55x_RS17260 | Not Available | Negative | 4313925 - 4314839 | 34017.9 |
| mfs transporter | LC55x_RS17265 | Not Available | Positive | 4314940 - 4316196 | 42523.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
